PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn173411
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ARR-B
Protein Properties Length: 660aa    MW: 71195.3 Da    PI: 6.1241
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn173411genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.53e-08226247122
     G2-like   1 kprlrWtpeLHerFveaveqLG 22 
                 kpr++W+ eLH++Fv+av+qLG
  Achn173411 226 KPRVVWSVELHQQFVSAVSQLG 247
                 79*******************6 PP

2Response_reg71.92.5e-24391501109
                   EEEESSSHHHHHHHHHHHH..HTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
  Response_reg   1 vlivdDeplvrellrqale..kegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                   vl+vdD+ + +++l+q+l+    ++  v+++++++ al+ll+ek+  +D++l D+ mp+mdG++ll++   e  +lp+i+++a g  + + + ++ G
    Achn173411  39 VLVVDDDVTCLRILEQMLRrcMYHVLAVTTCSEATVALNLLREKRgcFDVVLSDVYMPDMDGFKLLEHVGLEM-DLPVIMMSADGRTSAVMRGIRHG 134
                   89*****************6634444888999*************************************6644.8********************** PP

                   ESEEEESS--HHHHHH CS
  Response_reg  94 akdflsKpfdpeelvk 109
                   a  +l Kp+ +eel +
    Achn173411 135 ACNYLIKPIREEELKN 150
                   *************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521726.26E-3336166IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.3E-3936174No hitNo description
SMARTSM004484.1E-2837152IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011040.11238156IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.4E-2139150IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.33E-2440155No hitNo description
Gene3DG3DSA:1.10.10.601.3E-7224249IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    Send to blast
MAALQKLPQL CASMAANEPS STCKSEVVVS DQFPAGLRVL VVDDDVTCLR ILEQMLRRCM  60
YHVLAVTTCS EATVALNLLR EKRGCFDVVL SDVYMPDMDG FKLLEHVGLE MDLPVIMMSA  120
DGRTSAVMRG IRHGACNYLI KPIREEELKN IWQHVVRKRW NENKEHEHSG SLDDNDWHKR  180
GNDDTEFASS VNEGAEGLLK TQKKRRDAKE EDDGDLENDD PATAKKPRVV WSVELHQQFV  240
SAVSQLGIDM FFGIERCVDF EKFRLYLKRL SGVAQQQGGM PSSYCGSVEQ NGKPGSLGRF  300
DIPALAASGQ IPPQTLAALH AELLGQPNGN LVLPGMDQPL LQASLQGPKG ISVDHGVAYG  360
HPLVRCSTNI SKQFPLAIVT ADDVHSGLGA WPSNSPGPVG PGSNLSGLGV QSGNILMGML  420
HNQQQQPHLP PQQQKQAVQP EPSRLINVQP SCLVVPSQSS ASFQAGKNSV SINQNCSFNI  480
SSSMDYSVLS SQSNNSSFGI AQIMDGDPKT ASVLNGYSGP GSVSPSMSSC SINAENSANR  540
QLQNSTVASS AARQSPRLAP NMCDIQGSYN TNSGHVVDQG PLRNLGFVGK GTSIPSRFAV  600
DEPKSPMSNL NYGNGKIYGE NNGNKVKQEP SMDFIESAKV GIPILQNFSS NDLMSVFSE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010651276.10.0PREDICTED: two-component response regulator ARR1 isoform X1
SwissprotQ8H7S71e-133ORR21_ORYSJ; Two-component response regulator ORR21
TrEMBLF6HFD20.0F6HFD2_VITVI; Putative uncharacterized protein
STRINGVIT_01s0011g05830.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA77492130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-98response regulator 2